report.latex_reports
¶
Module Contents¶
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report.latex_reports.
get_latex_header
(pdftitle="SBpipe report", title="SBpipe report", abstract="Generic report.")[source]¶ Initialize a Latex header with a title and an abstract.
Parameters: - pdftitle – the pdftitle for the LaTeX header
- title – the title for the LaTeX header
- abstract – the abstract for the LaTeX header
Returns: the LaTeX header
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report.latex_reports.
latex_report_ps1
(outputdir, plots_folder, filename_prefix, model_noext, scanned_par)[source]¶ Generate a report for a single parameter scan task.
Parameters: - outputdir – the output directory
- plots_folder – the folder containing the simulated plots
- filename_prefix – the prefix for the LaTeX file
- model_noext – the model name
- scanned_par – the scanned parameter
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report.latex_reports.
latex_report_ps2
(outputdir, plots_folder, filename_prefix, model_noext, scanned_par1, scanned_par2)[source]¶ Generate a report for a double parameter scan task.
Parameters: - outputdir – the output directory
- plots_folder – the folder containing the simulated plots
- filename_prefix – the prefix for the LaTeX file
- model_noext – the model name
- scanned_par1 – the 1st scanned parameter
- scanned_par2 – the 2nd scanned parameter
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report.latex_reports.
latex_report_sim
(outputdir, plots_folder, model_noext, filename_prefix)[source]¶ Generate a report for a time course task.
Parameters: - outputdir – the output directory
- plots_folder – the folder containing the simulated plots
- model_noext – the model name
- filename_prefix – the prefix for the LaTeX file
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report.latex_reports.
latex_report_pe
(outputdir, plots_folder, model_noext, filename_prefix)[source]¶ Generate a report for a parameter estimation task.
Parameters: - outputdir – the output directory
- plots_folder – the folder containing the simulated plots
- model_noext – the model name
- filename_prefix – the prefix for the LaTeX file
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report.latex_reports.
latex_report
(outputdir, plots_folder, model_noext, filename_prefix, caption=False)[source]¶ Generate a generic report.
Parameters: - outputdir – the output directory
- plots_folder – the folder containing the simulated plots
- model_noext – the model name
- filename_prefix – the prefix for the LaTeX file
- caption – True if figure captions (=figure file name) should be added